Category : popen

Code: terminal ./foldx_20221231 –command=Stability –pdb=./input_file.pdb –out-pdb=1 Code: python import os import subprocess # path input_file=’./input_file.pdb path_foldx_scores_out=f'{path_input_file}/foldx.fxout’ path_foldx=’Tool/foldx5/foldx_20221231′ path_foldx_softlink=f'{source}/foldx_20221231′ # 10-1.run foldx with open(path_foldx_scores_out, ‘w’) as out_stream: os.symlink(path_foldx, path_foldx_softlink) execute_foldx=subprocess.Popen([path_foldx_softlink, ‘–command=Stability’, f’–pdb={input_file}’, ‘–out-pdb=1’], stdout=out_stream) execute_foldx.wait() Created files: terminal input_file_0_ST.fxout, rotabase.txt Created file: python foldx.fxout (context in foldx.fxout file) No pdbs for the run found at: "./" ..

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What specific syntax must be changed in the Python3 code below in order for the test_countLinesInLogFile(self) test to successfully run the self.runShellCommandForTests(myCommand) without throwing the ResourceWarning: unclosed file <_io.BufferedReader name=3> error that you see below? NOTE: Other postings for this error message failed to address the case of this being run from within a unit ..

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